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Last Update: 2018-11-10T20:19:53
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Repositories

  • Description: Head Repository for the Workshop
  • Stars: 1
  • Forks: 0
  • Description: fork of http://iwatch.sourceforge.net for extension
  • Stars: 1
  • Forks: 0
  • Open Issues: 1
  • Language: Perl
  • Description: an example respository to show usage of git-deploy
  • Stars: 1
  • Forks: 0
  • Language: Shell
  • Description: Read data from an Excel 2007+/XLSX format file.
  • Stars: 1
  • Forks: 0
  • Language: Perl
  • Description: Main distribution point of ZXID remains zxid.org, but this github repo provides resiliency
  • Stars: 0
  • Forks: 0
  • Language: C
  • Description: A Ruby wrapper for the Zenodo API.
  • Stars: 0
  • Forks: 0
  • Language: Ruby
  • Description: Service for downloading and consuming external data
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Travis CI Client (CLI and Ruby library)
  • Stars: 0
  • Forks: 0
  • Language: Ruby
  • Description: ThinkShout's shiny Jekyll based website.
  • Stars: 0
  • Forks: 0
  • Language: CSS
  • Description: Clip and extract text in clipboard-like way
  • Stars: 0
  • Forks: 0
  • Language: Perl6
  • Description: comma-separated values manipulator
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Edit a document via $EDITOR
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • http://www.syslog-ng.org/
  • Description: syslog-ng is an enhanced log daemon, supporting a wide range of input and output methods: syslog, unstructured text, queueing, SQL & NoSQL.
  • Stars: 0
  • Forks: 0
  • Language: C
  • Description: Apache passthrough authentication for StatusNet
  • Stars: 0
  • Forks: 0
  • Language: PHP
  • Description: Ubuntu 64 bit Vagrant VM for statistics and numerical libraries in Python
  • Stars: 0
  • Forks: 0
  • Language: Python
  • Description: Dockerised Ipython Notebook for statistical genetics and marker design
  • Stars: 0
  • Forks: 0
  • Language: Shell
  • Description: A demonstration repository
  • Stars: 0
  • Forks: 0
  • Language: R
  • Description: Updated build/specs for ruby-1.9.3
  • Stars: 0
  • Forks: 0
  • Description: A bidirectional interface between R and Perl
  • Stars: 0
  • Forks: 0
  • Language: C
  • Description: ODBC Database Access
  • Stars: 0
  • Forks: 0
  • Language: R
  • Description: R package that makes linux environment modules available from R
  • Stars: 0
  • Forks: 0
  • Language: R
  • Description: Community Recipes for Rex
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • http://rexify.org/
  • Description: A framework for server orchestration and to simplify system administration
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference transposable elements. Please read the wiki page (link below) for usage instructions. Also, there is a page on the wiki describing how the 1000 genomes CEU trio was carried out with the files and parameters used for the various steps.
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: RAILS v1.1 and Cobbler v0.2
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: :rainbow: Simple and fast image optimizer server you can host on your machine
  • Stars: 0
  • Forks: 0
  • Language: Go
  • Description: Perl Net::SAML2 module
  • Stars: 0
  • Forks: 0
  • Language: Perl6
  • Description: Statistics::ChiSquare
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: configure and cross-compile perl
  • Stars: 0
  • Forks: 0
  • Language: Shell
  • Description: builds Perl distributions with perlbrew
  • Stars: 0
  • Forks: 0
  • Description: This is an updated mirror of the original PacBio Read Simulator
  • Stars: 0
  • Forks: 0
  • Language: C++
  • Description: ftpd runner for tests
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: IO::Socket::SSL Perl Module
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Automatic display of plotly charts (Chart::Plotly::Plot objects) in Jupyter notebooks using Devel::IPerl kernel
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: mirror of cpan Alien::HTSlib 0.03
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: openlava project
  • Stars: 0
  • Forks: 0
  • Language: C
  • https://www.openebs.io
  • Description: OpenEBS is containerized block storage written in Go for cloud native and other environments w/ per container (or pod) QoS SLAs, tiering and replica policies across AZs and environments, and predictable and scalable performance.
  • Stars: 0
  • Forks: 0
  • Language: Go
  • Description: temporary test trap
  • Stars: 0
  • Forks: 0
  • Language: Shell
  • Description: Population genetics tests and estimators for pooled NGS data
  • Stars: 0
  • Forks: 0
  • Language: C
  • Description: NOVOPlasty - The organelle assembler
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • http://nokogiri.org/
  • Description: Nokogiri (鋸) is an HTML, XML, SAX, and Reader parser with XPath and CSS selector support.
  • Stars: 0
  • Forks: 0
  • Language: Java
  • Description: Record from sony minidisc devices automatically using netmd.
  • Stars: 0
  • Forks: 0
  • Language: Groff
  • Description: An interactive web map of the New Zealand Transport Agency's Crash Analysis System (CAS) data.
  • Stars: 0
  • Forks: 0
  • Language: Python
  • Description: OAuth support for Mojolicious
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Mojolicious App featuring basic authentication and Twitter Bootstrap
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Non-nonsense CSV operations in Perl 5 with Mojo flavour
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Mojo::Collection::Role::UtilsBy - List::UtilsBy methods for Mojo::Collection
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Matrices of real numbers in Perl
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: The code we use to render README.your_favorite_markup
  • Stars: 0
  • Forks: 0
  • Language: Ruby
  • Description: A program for the Maximum-likelihood analysis of population genomic data.
  • Stars: 0
  • Forks: 0
  • Language: C++
  • Description: Mac OS X equivalent for the ssh-askpass CLI that doesn't exist
  • Stars: 0
  • Forks: 0
  • Language: Shell
  • Description: A scripting and command-line front-end for GNU R
  • Stars: 0
  • Forks: 0
  • Language: Shell
  • Description: Free software for accessing MiniDisc devices
  • Stars: 0
  • Forks: 0
  • Language: C
  • Description: Automates job submission for testing high performance compute clusters.
  • Stars: 0
  • Forks: 0
  • Language: Python
  • Description: Cluster usage reporting and visualization tool supporting openLava, LSF, and Windows Compute Cluster
  • Stars: 0
  • Forks: 1
  • Language: Python
  • Description: A collection of knitr examples
  • Stars: 0
  • Forks: 0
  • Language: TeX
  • Description: Certificate extraction tool for Windows
  • Stars: 0
  • Forks: 0
  • Description: Jailbreak
  • Stars: 0
  • Forks: 0
  • Language: C++
  • Description: A set of guidelines for submitting issues and pull requests on projects
  • Stars: 0
  • Forks: 0
  • Description: Manipulate, Validate and Resolve IP Addresses
  • Stars: 0
  • Forks: 0
  • Open Issues: 1
  • Language: C++
  • Description: Perl script to dump/backup iPhoto/Aperture metadata
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Wrapper to place io heavy jobs in an openlava cluster directly on to the storage systems needed.
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: a minimal C++ interval tree implementation
  • Stars: 0
  • Forks: 0
  • Language: C++
  • Description: Perl module for generating pretty wordcloud images
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Buildpack for mod_perl
  • Stars: 0
  • Forks: 0
  • Language: Shell
  • Description: checks presence of various command line tools and their versions on the path
  • Stars: 0
  • Forks: 0
  • Language: Shell
  • Description: Genotyping Uncertainty with Sequencing data and linkage MAPping
  • Stars: 0
  • Forks: 0
  • Language: R
  • Description: Graphic User Interface for the eHive production system
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Utility to capture exposure bracketed images with a Raspberry for use in HDR photography
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Stuff that goes in ~/.pandoc
  • Stars: 0
  • Forks: 0
  • Description: A layperson's step-by-step guide to building webpages with Github
  • Stars: 0
  • Forks: 0
  • Language: CSS
  • Description: R bindings to the libgit2 library
  • Stars: 0
  • Forks: 0
  • Language: C
  • Description: Tool to manage using git as a deployment management tool
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: github like contributions calendar on terminal
  • Stars: 0
  • Forks: 0
  • Description: A Python script to compile contribution statistics for all org owned repos.
  • Stars: 0
  • Forks: 0
  • Language: Python
  • Description: A Mojo-based GitHub API implementation
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Online and command-line GFF3 validator
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Workflow for GBS in moa template format
  • Stars: 0
  • Forks: 0
  • Language: HTML
  • Description: Scripts for design of PCR-based Marker Assays from DNA sequence variant data, plus Galaxy xml files
  • Stars: 0
  • Forks: 0
  • Language: Python
  • http://foaas.com
  • Description: FOAAS (Fuck Off As A Service) provides a modern, RESTful, scalable solution to the common problem of telling people to fuck off.
  • Stars: 0
  • Forks: 0
  • Language: CoffeeScript
  • Description: Firmware Modification Kit forked from https://code.google.com/p/firmware-mod-kit/ modded for OSX
  • Stars: 0
  • Forks: 0
  • Language: C++
  • Description: support-request
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Fungal Genomics Mapping Pipeline
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: maintenance script to fatpack a script for distribution
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: flux for iOS
  • Stars: 0
  • Forks: 0
  • Language: Objective-C
  • Description: Perl XS for C++
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: understanding packrat as a reproducible research tool
  • Stars: 0
  • Forks: 0
  • Language: R
  • Description: Etherpad Lite plugin to trust authentication passed in from X-Forwarded-User HTTP header. This is useful when running behind a reverse proxy (a "series of tubes") that handles authentication. Do not use this plugin unless you have protected the server so that it can only be accessed from the reverse proxy.
  • Stars: 0
  • Forks: 0
  • Language: JavaScript
  • Description: Auxillary API for accessing Ensembl Genomes databases using the Ensembl Perl API
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: The code to run an Ensembl website
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Slurm Meadow for Ensembl Hive
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: EnsEMBL Hive - a system for creating and running pipelines on a distributed compute resource
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Modules to interface with tools used in Ensembl Gene Annotation Process and scripts to run pipelines
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: C API for the Ensembl Database
  • Stars: 0
  • Forks: 0
  • Language: C
  • Description: Org-based emacs.d (with Pallet and req-package goodness)
  • Stars: 0
  • Forks: 0
  • Language: Emacs Lisp
  • Description: tiny jQuery/Bootstrap widget that makes a HTML table editable
  • Stars: 0
  • Forks: 0
  • Language: HTML
  • Description: Plyr specialised for data frames: faster & with remote datastores
  • Stars: 0
  • Forks: 0
  • Description: Dpl (dee-pee-ell) is a deploy tool made for continuous deployment.
  • Stars: 0
  • Forks: 0
  • Language: Ruby
  • Description: Documentation
  • Stars: 0
  • Forks: 0
  • Language: HTML
  • Description: Emacs mode for editing Dockerfiles
  • Stars: 0
  • Forks: 0
  • Description: Dockerfile to build a container with the EnsEMBL Perl API and tools installed
  • Stars: 0
  • Forks: 0
  • Description: Tools to make an R developer's life easier
  • Stars: 0
  • Forks: 0
  • Language: R
  • Description: DBI - The Perl 5 Database Interface
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • http://stag.sourceforge.net/
  • Description: perl module for querying and manipulating complex data as recursively nested tag/value pairs (Structured tags or Simple Tree aggreggates)
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: A versatile (cross-)toolchain generator.
  • Stars: 0
  • Forks: 0
  • Language: Shell
  • Description: Generate a spec file for a CPAN module
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: A utility to produce RPM packages from CPAN modules
  • Stars: 0
  • Forks: 1
  • Language: Perl
  • Description: Test coverage reports for R
  • Stars: 0
  • Forks: 0
  • Language: R
  • Description: Various informatics/ IT courses attended
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Say you're a codfish.
  • Stars: 0
  • Forks: 15
  • Description: A toolkit of commands
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: A wrapper around Python's httplib for streaming, chunk-encoded HTTP requests
  • Stars: 0
  • Forks: 0
  • Language: Python
  • Description: something simple
  • Stars: 0
  • Forks: 2
  • Language: Perl
  • Description: mirror of cbase102 from http://www.retroarchive.org/garbo/pc/c-lang/index.html
  • Stars: 0
  • Forks: 0
  • Language: C
  • Description: Scanns for BLE Devices, shows advertsiment data and connect to device...
  • Stars: 0
  • Forks: 0
  • Language: Java
  • Description: Tools for querying and analysis of genomic data
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: :microscope: Path to a free self-taught education in Bioinformatics!
  • Stars: 0
  • Forks: 0
  • Description: Parses ISA-Tab investigation file and dependent files into one big hash-based Perl data structure
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Git repo for Bio::DB::HTS module on CPAN, providing Perl links into HTSlib
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: caching versions of LSF's bjobs and bhist
  • Stars: 0
  • Forks: 0
  • Language: Shell
  • Description: Programme, notes, slides etc. related to BBS meeting prior to MapNet2015
  • Stars: 0
  • Forks: 0
  • Description: Bayesian hierarchical model for complex trait analysis
  • Stars: 0
  • Forks: 0
  • Language: FORTRAN
  • Description: Bash Automated Testing System
  • Stars: 0
  • Forks: 0
  • Language: Shell
  • Description: Integrate with RealMe login and identity services (formerly "igovt logon")
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: collection of scripts and commands used by Ian Korf, Keith Bradnam, and Joe Fass in the analysis of Assemblathon 2 entries (assemblies)
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: mirror of code from http://mbioserv2.mbioekol.lu.se/ARAGORN/Downloads/
  • Stars: 0
  • Forks: 0
  • Language: C
  • Description: this is just a test.
  • Stars: 0
  • Forks: 0
  • Language: Batchfile
  • Description: Git command for shipping your project
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Readonly mirror of aports (http://git.alpinelinux.org/cgit/aports)
  • Stars: 0
  • Forks: 0
  • Language: Shell
  • Description: Program for analysing NGS data.
  • Stars: 0
  • Forks: 0
  • Language: C++
  • Description: Alien wrapper for OpenSSL
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Alien wrapper for NSS ( Network Security Services )
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Discover or download and install curl + libcurl
  • Stars: 0
  • Forks: 0
  • Language: Perl
  • Description: Build external dependencies for use in CPAN
  • Stars: 0
  • Forks: 0
  • Language: Perl